WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05H8.1a.1 Sequence Name  C05H8.1a.1
Length (nt)  1784   Chromosome Location  III: 5651543-5654564
Chromosome . Primary Identifier  III Chromosome Location . Start  5651543
Chromosome Location . End  5654564 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05H8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000518 ckk-1 C05H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05H8.1a C05H8.1a 1299   III: 5651743-5651829

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05H8.1a.1 5651543 5654564 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89475   287   III: 5651543-5651829 Caenorhabditis elegans
Exon89477   237   III: 5652109-5652345 Caenorhabditis elegans
Exon89479   148   III: 5652533-5652680 Caenorhabditis elegans
Exon89481   74   III: 5652871-5652944 Caenorhabditis elegans
Exon89483   183   III: 5653024-5653206 Caenorhabditis elegans
Exon89485   341   III: 5653266-5653606 Caenorhabditis elegans
Exon89487   126   III: 5653653-5653778 Caenorhabditis elegans
Exon89492   388   III: 5654177-5654564 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05H8.1a.1 5651543 5654564 1

1 Sequence

Length
1784

1 Sequence Ontology Term

Identifier Name Description
transcript