WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05H8.1b.1 Sequence Name  C05H8.1b.1
Length (nt)  1916   Chromosome Location  III: 5635479-5654559
Chromosome . Primary Identifier  III Chromosome Location . Start  5635479
Chromosome Location . End  5654559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05H8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000518 ckk-1 C05H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05H8.1b C05H8.1b 1626   III: 5635489-5635574

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05H8.1b.1 5635479 5654559 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89472   96   III: 5635479-5635574 Caenorhabditis elegans
Exon89473   205   III: 5645101-5645305 Caenorhabditis elegans
Exon89474   51   III: 5649347-5649397 Caenorhabditis elegans
Exon89476   72   III: 5651758-5651829 Caenorhabditis elegans
Exon89478   237   III: 5652109-5652345 Caenorhabditis elegans
Exon89480   148   III: 5652533-5652680 Caenorhabditis elegans
Exon89482   74   III: 5652871-5652944 Caenorhabditis elegans
Exon89484   183   III: 5653024-5653206 Caenorhabditis elegans
Exon89486   341   III: 5653266-5653606 Caenorhabditis elegans
Exon89488   126   III: 5653653-5653778 Caenorhabditis elegans
Exon89491   383   III: 5654177-5654559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05H8.1b.1 5635479 5654559 1

1 Sequence

Length
1916

1 Sequence Ontology Term

Identifier Name Description
transcript