WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.1c.1 Sequence Name  C05D2.1c.1
Length (nt)  2648   Chromosome Location  III: 5625136-5632307
Chromosome . Primary Identifier  III Chromosome Location . Start  5625136
Chromosome Location . End  5632307 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000900 daf-4 C05D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.1c C05D2.1c 1779   III: 5626667-5626714

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D2.1c.1 5625136 5632307 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89407   147   III: 5625136-5625282 Caenorhabditis elegans
Exon89414   75   III: 5625420-5625494 Caenorhabditis elegans
Exon89416   123   III: 5625863-5625985 Caenorhabditis elegans
Exon89422   108   III: 5626607-5626714 Caenorhabditis elegans
Exon89427   109   III: 5626764-5626872 Caenorhabditis elegans
Exon89434   63   III: 5628496-5628558 Caenorhabditis elegans
Exon89441   146   III: 5628669-5628814 Caenorhabditis elegans
Exon89448   108   III: 5628862-5628969 Caenorhabditis elegans
Exon89455   386   III: 5629461-5629846 Caenorhabditis elegans
Exon89462   701   III: 5630458-5631158 Caenorhabditis elegans
Exon89468   682   III: 5631626-5632307 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D2.1c.1 5625136 5632307 1

1 Sequence

Length
2648

1 Sequence Ontology Term

Identifier Name Description
transcript