WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.1e.1 Sequence Name  C05D2.1e.1
Length (nt)  2658   Chromosome Location  III: 5625135-5632322
Chromosome . Primary Identifier  III Chromosome Location . Start  5625135
Chromosome Location . End  5632322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000900 daf-4 C05D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.1e C05D2.1e 2172   III: 5625142-5625282

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.1e.1 5625135 5632322 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89406   148   III: 5625135-5625282 Caenorhabditis elegans
Exon89413   132   III: 5625363-5625494 Caenorhabditis elegans
Exon89419   123   III: 5625863-5625985 Caenorhabditis elegans
Exon89425   108   III: 5626607-5626714 Caenorhabditis elegans
Exon89431   109   III: 5626764-5626872 Caenorhabditis elegans
Exon89445   146   III: 5628669-5628814 Caenorhabditis elegans
Exon89452   108   III: 5628862-5628969 Caenorhabditis elegans
Exon89458   386   III: 5629461-5629846 Caenorhabditis elegans
Exon89465   701   III: 5630458-5631158 Caenorhabditis elegans
Exon89470   697   III: 5631626-5632322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.1e.1 5625135 5632322 1

1 Sequence

Length
2658

1 Sequence Ontology Term

Identifier Name Description
transcript