WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.3.1 Sequence Name  C05D2.3.1
Length (nt)  1601   Chromosome Location  III: 5614948-5617261
Chromosome . Primary Identifier  III Chromosome Location . Start  5614948
Chromosome Location . End  5617261 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015467 basl-1 C05D2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.3 C05D2.3 1530   III: 5614972-5615094

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.3.1 5614948 5617261 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89396   147   III: 5614948-5615094 Caenorhabditis elegans
Exon89397   675   III: 5615141-5615815 Caenorhabditis elegans
Exon89398   127   III: 5615971-5616097 Caenorhabditis elegans
Exon89399   209   III: 5616143-5616351 Caenorhabditis elegans
Exon89400   99   III: 5616396-5616494 Caenorhabditis elegans
Exon89401   105   III: 5616643-5616747 Caenorhabditis elegans
Exon89402   75   III: 5616979-5617053 Caenorhabditis elegans
Exon89403   164   III: 5617098-5617261 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.3.1 5614948 5617261 1

1 Sequence

Length
1601

1 Sequence Ontology Term

Identifier Name Description
transcript