WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.4a.1 Sequence Name  C05D2.4a.1
Length (nt)  1617   Chromosome Location  III: 5612274-5614660
Chromosome . Primary Identifier  III Chromosome Location . Start  5612274
Chromosome Location . End  5614660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000239 bas-1 C05D2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.4a C05D2.4a 1545   III: 5612289-5612411

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.4a.1 5612274 5614660 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89382   138   III: 5612274-5612411 Caenorhabditis elegans
Exon89383   468   III: 5612551-5613018 Caenorhabditis elegans
Exon89386   210   III: 5613384-5613593 Caenorhabditis elegans
Exon89388   354   III: 5613640-5613993 Caenorhabditis elegans
Exon89390   99   III: 5614040-5614138 Caenorhabditis elegans
Exon89392   105   III: 5614208-5614312 Caenorhabditis elegans
Exon89394   243   III: 5614418-5614660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.4a.1 5612274 5614660 1

1 Sequence

Length
1617

1 Sequence Ontology Term

Identifier Name Description
transcript