WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.8.1 Sequence Name  C05D2.8.1
Length (nt)  1348   Chromosome Location  III: 5607509-5610346
Chromosome . Primary Identifier  III Chromosome Location . Start  5607509
Chromosome Location . End  5610346 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015469 C05D2.8 C05D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.8 C05D2.8 1281   III: 5607574-5607838

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.8.1 5607509 5610346 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89373   330   III: 5607509-5607838 Caenorhabditis elegans
Exon89374   111   III: 5608323-5608433 Caenorhabditis elegans
Exon89375   241   III: 5608478-5608718 Caenorhabditis elegans
Exon89376   76   III: 5609122-5609197 Caenorhabditis elegans
Exon89377   132   III: 5609248-5609379 Caenorhabditis elegans
Exon89378   171   III: 5609432-5609602 Caenorhabditis elegans
Exon89379   178   III: 5609805-5609982 Caenorhabditis elegans
Exon89380   109   III: 5610238-5610346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.8.1 5607509 5610346 -1

1 Sequence

Length
1348

1 Sequence Ontology Term

Identifier Name Description
transcript