WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.5.1 Sequence Name  C05D2.5.1
Length (nt)  2317   Chromosome Location  III: 5604460-5607556
Chromosome . Primary Identifier  III Chromosome Location . Start  5604460
Chromosome Location . End  5607556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001514 xnd-1 C05D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.5 C05D2.5 2109   III: 5604461-5604833

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.5.1 5604460 5607556 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89365   374   III: 5604460-5604833 Caenorhabditis elegans
Exon89366   190   III: 5604880-5605069 Caenorhabditis elegans
Exon89367   92   III: 5605120-5605211 Caenorhabditis elegans
Exon89368   202   III: 5605259-5605460 Caenorhabditis elegans
Exon89369   247   III: 5605550-5605796 Caenorhabditis elegans
Exon89370   339   III: 5606254-5606592 Caenorhabditis elegans
Exon89371   582   III: 5606637-5607218 Caenorhabditis elegans
Exon89372   291   III: 5607266-5607556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.5.1 5604460 5607556 1

1 Sequence

Length
2317

1 Sequence Ontology Term

Identifier Name Description
transcript