WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.6a.1 Sequence Name  C05D2.6a.1
Length (nt)  1788   Chromosome Location  III: 5600387-5603451
Chromosome . Primary Identifier  III Chromosome Location . Start  5600387
Chromosome Location . End  5603451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015468 madf-11 C05D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.6a C05D2.6a 1551   III: 5600603-5600755

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.6a.1 5600387 5603451 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89344   369   III: 5600387-5600755 Caenorhabditis elegans
Exon89345   140   III: 5601193-5601332 Caenorhabditis elegans
Exon89347   284   III: 5601377-5601660 Caenorhabditis elegans
Exon89349   53   III: 5601709-5601761 Caenorhabditis elegans
Exon89351   228   III: 5601804-5602031 Caenorhabditis elegans
Exon89357   272   III: 5602601-5602872 Caenorhabditis elegans
Exon89358   262   III: 5602921-5603182 Caenorhabditis elegans
Exon89360   92   III: 5603227-5603318 Caenorhabditis elegans
Exon89362   88   III: 5603364-5603451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05D2.6a.1 5600387 5603451 -1

1 Sequence

Length
1788

1 Sequence Ontology Term

Identifier Name Description
transcript