WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D2.1a.1 Sequence Name  F56D2.1a.1
Length (nt)  1709   Chromosome Location  III: 5592135-5594401
Chromosome . Primary Identifier  III Chromosome Location . Start  5592135
Chromosome Location . End  5594401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018963 ucr-1 F56D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D2.1a F56D2.1a 1416   III: 5592158-5592211

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56D2.1a.1 5592135 5594401 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89295   77   III: 5592135-5592211 Caenorhabditis elegans
Exon89297   126   III: 5592354-5592479 Caenorhabditis elegans
Exon89299   217   III: 5592529-5592745 Caenorhabditis elegans
Exon89301   200   III: 5592795-5592994 Caenorhabditis elegans
Exon89305   243   III: 5593039-5593281 Caenorhabditis elegans
Exon89309   58   III: 5593331-5593388 Caenorhabditis elegans
Exon89315   112   III: 5593446-5593557 Caenorhabditis elegans
Exon89317   211   III: 5593610-5593820 Caenorhabditis elegans
Exon89321   130   III: 5593871-5594000 Caenorhabditis elegans
Exon89328   335   III: 5594067-5594401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56D2.1a.1 5592135 5594401 1

1 Sequence

Length
1709

1 Sequence Ontology Term

Identifier Name Description
transcript