WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1044.2c.1 Sequence Name  D1044.2c.1
Length (nt)  4021   Chromosome Location  III: 5526104-5535499
Chromosome . Primary Identifier  III Chromosome Location . Start  5526104
Chromosome Location . End  5535499 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017028 dex-1 D1044.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1044.2c D1044.2c 3414   III: 5526104-5526145

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2c.1 5526104 5535499 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89107   42   III: 5526104-5526145 Caenorhabditis elegans
Exon89109   210   III: 5527747-5527956 Caenorhabditis elegans
Exon89113   147   III: 5528443-5528589 Caenorhabditis elegans
Exon89116   148   III: 5528636-5528783 Caenorhabditis elegans
Exon89119   131   III: 5528829-5528959 Caenorhabditis elegans
Exon89122   96   III: 5529477-5529572 Caenorhabditis elegans
Exon89125   181   III: 5530055-5530235 Caenorhabditis elegans
Exon89128   270   III: 5530310-5530579 Caenorhabditis elegans
Exon89131   509   III: 5530754-5531262 Caenorhabditis elegans
Exon89134   720   III: 5531597-5532316 Caenorhabditis elegans
Exon89137   174   III: 5532515-5532688 Caenorhabditis elegans
Exon89140   379   III: 5532745-5533123 Caenorhabditis elegans
Exon89143   245   III: 5533524-5533768 Caenorhabditis elegans
Exon89144   135   III: 5533877-5534011 Caenorhabditis elegans
Exon89145   634   III: 5534866-5535499 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2c.1 5526104 5535499 1

1 Sequence

Length
4021

1 Sequence Ontology Term

Identifier Name Description
transcript