WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E8.5.1 Sequence Name  F48E8.5.1
Length (nt)  2159   Chromosome Location  III: 5450730-5453137
Chromosome . Primary Identifier  III Chromosome Location . Start  5450730
Chromosome Location . End  5453137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003901 paa-1 F48E8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E8.5 F48E8.5 1773   III: 5450741-5451249

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E8.5.1 5450730 5453137 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88954   520   III: 5450730-5451249 Caenorhabditis elegans
Exon88955   860   III: 5451301-5452160 Caenorhabditis elegans
Exon88956   218   III: 5452208-5452425 Caenorhabditis elegans
Exon88957   80   III: 5452479-5452558 Caenorhabditis elegans
Exon88958   92   III: 5452603-5452694 Caenorhabditis elegans
Exon88959   389   III: 5452749-5453137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E8.5.1 5450730 5453137 1

1 Sequence

Length
2159

1 Sequence Ontology Term

Identifier Name Description
transcript