WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E8.7a.1 Sequence Name  F48E8.7a.1
Length (nt)  1425   Chromosome Location  III: 5446513-5448279
Chromosome . Primary Identifier  III Chromosome Location . Start  5446513
Chromosome Location . End  5448279 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E8.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018613 skpt-1 F48E8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E8.7a F48E8.7a 1266   III: 5446636-5446831

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E8.7a.1 5446513 5448279 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88931   319   III: 5446513-5446831 Caenorhabditis elegans
Exon88932   163   III: 5446882-5447044 Caenorhabditis elegans
Exon88934   134   III: 5447095-5447228 Caenorhabditis elegans
Exon88936   287   III: 5447338-5447624 Caenorhabditis elegans
Exon88938   325   III: 5447668-5447992 Caenorhabditis elegans
Exon88941   82   III: 5448040-5448121 Caenorhabditis elegans
Exon88942   115   III: 5448165-5448279 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E8.7a.1 5446513 5448279 -1

1 Sequence

Length
1425

1 Sequence Ontology Term

Identifier Name Description
transcript