WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E8.7b.1 Sequence Name  F48E8.7b.1
Length (nt)  1534   Chromosome Location  III: 5446511-5448395
Chromosome . Primary Identifier  III Chromosome Location . Start  5446511
Chromosome Location . End  5448395 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E8.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018613 skpt-1 F48E8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E8.7b F48E8.7b 1257   III: 5446636-5446831

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E8.7b.1 5446511 5448395 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88930   321   III: 5446511-5446831 Caenorhabditis elegans
Exon88933   163   III: 5446882-5447044 Caenorhabditis elegans
Exon88935   134   III: 5447095-5447228 Caenorhabditis elegans
Exon88937   287   III: 5447338-5447624 Caenorhabditis elegans
Exon88939   325   III: 5447668-5447992 Caenorhabditis elegans
Exon88940   73   III: 5448040-5448112 Caenorhabditis elegans
Exon88943   231   III: 5448165-5448395 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E8.7b.1 5446511 5448395 -1

1 Sequence

Length
1534

1 Sequence Ontology Term

Identifier Name Description
transcript