WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C9.1.1 Sequence Name  F52C9.1.1
Length (nt)  4234   Chromosome Location  III: 5326623-5333620
Chromosome . Primary Identifier  III Chromosome Location . Start  5326623
Chromosome Location . End  5333620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018672 sorf-2 F52C9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C9.1 F52C9.1 4149   III: 5326631-5326806

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52C9.1.1 5326623 5333620 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88542   184   III: 5326623-5326806 Caenorhabditis elegans
Exon88543   726   III: 5327221-5327946 Caenorhabditis elegans
Exon88544   218   III: 5328218-5328435 Caenorhabditis elegans
Exon88545   149   III: 5328525-5328673 Caenorhabditis elegans
Exon88546   135   III: 5328774-5328908 Caenorhabditis elegans
Exon88547   138   III: 5329297-5329434 Caenorhabditis elegans
Exon88548   334   III: 5329481-5329814 Caenorhabditis elegans
Exon88549   503   III: 5329859-5330361 Caenorhabditis elegans
Exon88550   351   III: 5330528-5330878 Caenorhabditis elegans
Exon88551   159   III: 5331099-5331257 Caenorhabditis elegans
Exon88552   350   III: 5331528-5331877 Caenorhabditis elegans
Exon88553   123   III: 5331934-5332056 Caenorhabditis elegans
Exon88554   362   III: 5332102-5332463 Caenorhabditis elegans
Exon88555   107   III: 5332587-5332693 Caenorhabditis elegans
Exon88556   170   III: 5333180-5333349 Caenorhabditis elegans
Exon88557   225   III: 5333396-5333620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52C9.1.1 5326623 5333620 1

1 Sequence

Length
4234

1 Sequence Ontology Term

Identifier Name Description
transcript