WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C9.8a.1 Sequence Name  F52C9.8a.1
Length (nt)  5539   Chromosome Location  III: 5311246-5321736
Chromosome . Primary Identifier  III Chromosome Location . Start  5311246
Chromosome Location . End  5321736 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C9.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004095 pqe-1 F52C9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C9.8a F52C9.8a 3246   III: 5311260-5311329

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52C9.8a.1 5311246 5321736 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88459   84   III: 5311246-5311329 Caenorhabditis elegans
Exon88461   77   III: 5311771-5311847 Caenorhabditis elegans
Exon88468   54   III: 5311952-5312005 Caenorhabditis elegans
Exon88475   84   III: 5312054-5312137 Caenorhabditis elegans
Exon88482   93   III: 5312452-5312544 Caenorhabditis elegans
Exon88487   1504   III: 5312614-5314117 Caenorhabditis elegans
Exon88493   1601   III: 5314169-5315769 Caenorhabditis elegans
Exon88500   237   III: 5315809-5316045 Caenorhabditis elegans
Exon88505   177   III: 5316095-5316271 Caenorhabditis elegans
Exon88511   214   III: 5316699-5316912 Caenorhabditis elegans
Exon88519   731   III: 5319927-5320657 Caenorhabditis elegans
Exon88532   683   III: 5321054-5321736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52C9.8a.1 5311246 5321736 1

1 Sequence

Length
5539

1 Sequence Ontology Term

Identifier Name Description
transcript