WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C9.8c.1 Sequence Name  F52C9.8c.1
Length (nt)  2391   Chromosome Location  III: 5311246-5321735
Chromosome . Primary Identifier  III Chromosome Location . Start  5311246
Chromosome Location . End  5321735 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C9.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004095 pqe-1 F52C9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C9.8c F52C9.8c 2013   III: 5311260-5311329

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52C9.8c.1 5311246 5321735 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88458   84   III: 5311246-5311329 Caenorhabditis elegans
Exon88466   77   III: 5311771-5311847 Caenorhabditis elegans
Exon88473   54   III: 5311952-5312005 Caenorhabditis elegans
Exon88480   84   III: 5312054-5312137 Caenorhabditis elegans
Exon88498   57   III: 5315713-5315769 Caenorhabditis elegans
Exon88504   231   III: 5315815-5316045 Caenorhabditis elegans
Exon88509   177   III: 5316095-5316271 Caenorhabditis elegans
Exon88516   214   III: 5316699-5316912 Caenorhabditis elegans
Exon88524   731   III: 5319927-5320657 Caenorhabditis elegans
Exon88531   682   III: 5321054-5321735 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52C9.8c.1 5311246 5321735 1

1 Sequence

Length
2391

1 Sequence Ontology Term

Identifier Name Description
transcript