WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C9.8a.4 Sequence Name  F52C9.8a.4
Length (nt)  5597   Chromosome Location  III: 5311246-5321706
Chromosome . Primary Identifier  III Chromosome Location . Start  5311246
Chromosome Location . End  5321706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C9.8a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004095 pqe-1 F52C9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C9.8a F52C9.8a 3246   III: 5311260-5311329

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52C9.8a.4 5311246 5321706 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88455   84   III: 5311246-5311329 Caenorhabditis elegans
Exon88464   77   III: 5311771-5311847 Caenorhabditis elegans
Exon88471   54   III: 5311952-5312005 Caenorhabditis elegans
Exon88478   84   III: 5312054-5312137 Caenorhabditis elegans
Exon88485   93   III: 5312452-5312544 Caenorhabditis elegans
Exon88490   1504   III: 5312614-5314117 Caenorhabditis elegans
Exon88496   2103   III: 5314169-5316271 Caenorhabditis elegans
Exon88514   214   III: 5316699-5316912 Caenorhabditis elegans
Exon88522   731   III: 5319927-5320657 Caenorhabditis elegans
Exon88528   653   III: 5321054-5321706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52C9.8a.4 5311246 5321706 1

1 Sequence

Length
5597

1 Sequence Ontology Term

Identifier Name Description
transcript