WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C9.8b.1 Sequence Name  F52C9.8b.1
Length (nt)  5338   Chromosome Location  III: 5311240-5321745
Chromosome . Primary Identifier  III Chromosome Location . Start  5311240
Chromosome Location . End  5321745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C9.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004095 pqe-1 F52C9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C9.8b F52C9.8b 4944   III: 5311260-5311329

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52C9.8b.1 5311240 5321745 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88454   90   III: 5311240-5311329 Caenorhabditis elegans
Exon88465   77   III: 5311771-5311847 Caenorhabditis elegans
Exon88472   54   III: 5311952-5312005 Caenorhabditis elegans
Exon88479   84   III: 5312054-5312137 Caenorhabditis elegans
Exon88486   93   III: 5312452-5312544 Caenorhabditis elegans
Exon88491   1504   III: 5312614-5314117 Caenorhabditis elegans
Exon88492   1334   III: 5314169-5315502 Caenorhabditis elegans
Exon88497   57   III: 5315713-5315769 Caenorhabditis elegans
Exon88503   231   III: 5315815-5316045 Caenorhabditis elegans
Exon88508   177   III: 5316095-5316271 Caenorhabditis elegans
Exon88515   214   III: 5316699-5316912 Caenorhabditis elegans
Exon88523   731   III: 5319927-5320657 Caenorhabditis elegans
Exon88534   692   III: 5321054-5321745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52C9.8b.1 5311240 5321745 1

1 Sequence

Length
5338

1 Sequence Ontology Term

Identifier Name Description
transcript