WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D2.2.1 Sequence Name  K10D2.2.1
Length (nt)  2324   Chromosome Location  III: 5185920-5188586
Chromosome . Primary Identifier  III Chromosome Location . Start  5185920
Chromosome Location . End  5188586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019628 pup-2 K10D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D2.2 K10D2.2 1527   III: 5186016-5186030

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K10D2.2.1 5185920 5188586 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88044   111   III: 5185920-5186030 Caenorhabditis elegans
Exon88045   238   III: 5186078-5186315 Caenorhabditis elegans
Exon88046   67   III: 5186391-5186457 Caenorhabditis elegans
Exon88047   414   III: 5186508-5186921 Caenorhabditis elegans
Exon88048   515   III: 5186983-5187497 Caenorhabditis elegans
Exon88049   158   III: 5187546-5187703 Caenorhabditis elegans
Exon88050   821   III: 5187766-5188586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K10D2.2.1 5185920 5188586 1

1 Sequence

Length
2324

1 Sequence Ontology Term

Identifier Name Description
transcript