WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54H5A.2.1 Sequence Name  Y54H5A.2.1
Length (nt)  1222   Chromosome Location  III: 5137358-5149578
Chromosome . Primary Identifier  III Chromosome Location . Start  5137358
Chromosome Location . End  5149578 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54H5A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021900 Y54H5A.2 Y54H5A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54H5A.2 Y54H5A.2 1128   III: 5137452-5137709

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54H5A.2.1 5137358 5149578 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87964   352   III: 5137358-5137709 Caenorhabditis elegans
Exon87965   188   III: 5138093-5138280 Caenorhabditis elegans
Exon87967   135   III: 5146015-5146149 Caenorhabditis elegans
Exon87968   114   III: 5146225-5146338 Caenorhabditis elegans
Exon87970   115   III: 5148594-5148708 Caenorhabditis elegans
Exon87971   259   III: 5149216-5149474 Caenorhabditis elegans
Exon87972   59   III: 5149520-5149578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54H5A.2.1 5137358 5149578 -1

1 Sequence

Length
1222

1 Sequence Ontology Term

Identifier Name Description
transcript