WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D8.6.1 Sequence Name  F54D8.6.1
Length (nt)  2597   Chromosome Location  III: 5102985-5107020
Chromosome . Primary Identifier  III Chromosome Location . Start  5102985
Chromosome Location . End  5107020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018802 F54D8.6 F54D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D8.6 F54D8.6 2391   III: 5102991-5103526

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D8.6.1 5102985 5107020 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87902   542   III: 5102985-5103526 Caenorhabditis elegans
Exon87903   146   III: 5103576-5103721 Caenorhabditis elegans
Exon87904   101   III: 5104160-5104260 Caenorhabditis elegans
Exon87905   92   III: 5104312-5104403 Caenorhabditis elegans
Exon87906   51   III: 5104456-5104506 Caenorhabditis elegans
Exon87907   54   III: 5104552-5104605 Caenorhabditis elegans
Exon87908   41   III: 5104655-5104695 Caenorhabditis elegans
Exon87909   134   III: 5104750-5104883 Caenorhabditis elegans
Exon87910   754   III: 5105102-5105855 Caenorhabditis elegans
Exon87911   115   III: 5105942-5106056 Caenorhabditis elegans
Exon87912   111   III: 5106332-5106442 Caenorhabditis elegans
Exon87913   99   III: 5106498-5106596 Caenorhabditis elegans
Exon87914   357   III: 5106664-5107020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D8.6.1 5102985 5107020 1

1 Sequence

Length
2597

1 Sequence Ontology Term

Identifier Name Description
transcript