WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D8.2 Sequence Name  F54D8.2
Length (nt)  387   Chromosome Location  III: 5081735-5081870
Chromosome . Primary Identifier  III Chromosome Location . Start  5081735
Chromosome Location . End  5081870
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 
Lists
This CDS isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D8.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01308 COX-6A 14.7 128 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00078628
WBRNAi00048324
WBRNAi00066686
WBRNAi00015624
WBRNAi00076475
WBRNAi00005983
WBRNAi00032801
WBRNAi00112800
WBRNAi00112860
WBRNAi00112920
WBRNAi00078563
WBRNAi00066619

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F54D8.2 5081735 5081870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006519 cox-6A F54D8.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F54D8.2 5081735 5081870 1
CDS:F54D8.2 5081938 5082089 1
CDS:F54D8.2 5082759 5082857 1

1 Sequence

Length
387

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D8.2.4 F54D8.2.4 536   III: 5081724-5082995
Transcript:F54D8.2.5 F54D8.2.5 503   III: 5081724-5082962
Transcript:F54D8.2.3 F54D8.2.3 490   III: 5081726-5082951
Transcript:F54D8.2.2 F54D8.2.2 493   III: 5081726-5082954
Transcript:F54D8.2.1 F54D8.2.1 526   III: 5081726-5082987