WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D8.3b.2 Sequence Name  F54D8.3b.2
Length (nt)  1592   Chromosome Location  III: 5078419-5080505
Chromosome . Primary Identifier  III Chromosome Location . Start  5078419
Chromosome Location . End  5080505 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D8.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D8.3b F54D8.3b 1269   III: 5078789-5078943

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54D8.3b.2 5078419 5080505 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87857   281   III: 5078419-5078699 Caenorhabditis elegans
Exon87861   197   III: 5078747-5078943 Caenorhabditis elegans
Exon87864   278   III: 5079285-5079562 Caenorhabditis elegans
Exon87867   747   III: 5079609-5080355 Caenorhabditis elegans
Exon87868   89   III: 5080417-5080505 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54D8.3b.2 5078419 5080505 1

1 Sequence

Length
1592

1 Sequence Ontology Term

Identifier Name Description
transcript