WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R144.2a.1 Sequence Name  R144.2a.1
Length (nt)  2840   Chromosome Location  III: 5025344-5029647
Chromosome . Primary Identifier  III Chromosome Location . Start  5025344
Chromosome Location . End  5029647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R144.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020092 pcf-11 R144.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R144.2a R144.2a 2472   III: 5025408-5025698

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R144.2a.1 5025344 5029647 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87717   355   III: 5025344-5025698 Caenorhabditis elegans
Exon87718   99   III: 5026383-5026481 Caenorhabditis elegans
Exon87722   222   III: 5026563-5026784 Caenorhabditis elegans
Exon87726   62   III: 5027051-5027112 Caenorhabditis elegans
Exon87728   228   III: 5027355-5027582 Caenorhabditis elegans
Exon87731   578   III: 5027628-5028205 Caenorhabditis elegans
Exon87734   320   III: 5028254-5028573 Caenorhabditis elegans
Exon87737   573   III: 5028623-5029195 Caenorhabditis elegans
Exon87740   403   III: 5029245-5029647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R144.2a.1 5025344 5029647 1

1 Sequence

Length
2840

1 Sequence Ontology Term

Identifier Name Description
transcript