WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27F2.2b.1 Sequence Name  C27F2.2b.1
Length (nt)  5292   Chromosome Location  III: 4970249-4979575
Chromosome . Primary Identifier  III Chromosome Location . Start  4970249
Chromosome Location . End  4979575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003558 nca-2 C27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27F2.2b C27F2.2b 5292   III: 4970249-4970381

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27F2.2b.1 4970249 4979575 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87518   133   III: 4970249-4970381 Caenorhabditis elegans
Exon87521   329   III: 4971299-4971627 Caenorhabditis elegans
Exon87523   113   III: 4971704-4971816 Caenorhabditis elegans
Exon87525   421   III: 4971895-4972315 Caenorhabditis elegans
Exon87527   195   III: 4972553-4972747 Caenorhabditis elegans
Exon87529   244   III: 4972801-4973044 Caenorhabditis elegans
Exon87531   251   III: 4973507-4973757 Caenorhabditis elegans
Exon87533   138   III: 4973866-4974003 Caenorhabditis elegans
Exon87535   286   III: 4974052-4974337 Caenorhabditis elegans
Exon87537   391   III: 4974757-4975147 Caenorhabditis elegans
Exon87539   177   III: 4975199-4975375 Caenorhabditis elegans
Exon87541   136   III: 4975427-4975562 Caenorhabditis elegans
Exon87543   132   III: 4975711-4975842 Caenorhabditis elegans
Exon87545   168   III: 4975893-4976060 Caenorhabditis elegans
Exon87547   333   III: 4976361-4976693 Caenorhabditis elegans
Exon87549   514   III: 4976815-4977328 Caenorhabditis elegans
Exon87551   253   III: 4977566-4977818 Caenorhabditis elegans
Exon87553   230   III: 4977874-4978103 Caenorhabditis elegans
Exon87555   274   III: 4978366-4978639 Caenorhabditis elegans
Exon87557   163   III: 4978701-4978863 Caenorhabditis elegans
Exon87559   168   III: 4978913-4979080 Caenorhabditis elegans
Exon87560   243   III: 4979333-4979575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27F2.2b.1 4970249 4979575 1

1 Sequence

Length
5292

1 Sequence Ontology Term

Identifier Name Description
transcript