WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27F2.2a.1 Sequence Name  C27F2.2a.1
Length (nt)  5611   Chromosome Location  III: 4965571-4979738
Chromosome . Primary Identifier  III Chromosome Location . Start  4965571
Chromosome Location . End  4979738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003558 nca-2 C27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27F2.2a C27F2.2a 5358   III: 4965661-4965688

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27F2.2a.1 4965571 4979738 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87514   118   III: 4965571-4965688 Caenorhabditis elegans
Exon87517   171   III: 4970211-4970381 Caenorhabditis elegans
Exon87520   329   III: 4971299-4971627 Caenorhabditis elegans
Exon87522   113   III: 4971704-4971816 Caenorhabditis elegans
Exon87524   421   III: 4971895-4972315 Caenorhabditis elegans
Exon87526   195   III: 4972553-4972747 Caenorhabditis elegans
Exon87528   244   III: 4972801-4973044 Caenorhabditis elegans
Exon87530   251   III: 4973507-4973757 Caenorhabditis elegans
Exon87532   138   III: 4973866-4974003 Caenorhabditis elegans
Exon87534   286   III: 4974052-4974337 Caenorhabditis elegans
Exon87536   391   III: 4974757-4975147 Caenorhabditis elegans
Exon87538   177   III: 4975199-4975375 Caenorhabditis elegans
Exon87540   136   III: 4975427-4975562 Caenorhabditis elegans
Exon87542   132   III: 4975711-4975842 Caenorhabditis elegans
Exon87544   168   III: 4975893-4976060 Caenorhabditis elegans
Exon87546   333   III: 4976361-4976693 Caenorhabditis elegans
Exon87548   514   III: 4976815-4977328 Caenorhabditis elegans
Exon87550   253   III: 4977566-4977818 Caenorhabditis elegans
Exon87552   230   III: 4977874-4978103 Caenorhabditis elegans
Exon87554   274   III: 4978366-4978639 Caenorhabditis elegans
Exon87556   163   III: 4978701-4978863 Caenorhabditis elegans
Exon87558   168   III: 4978913-4979080 Caenorhabditis elegans
Exon87561   406   III: 4979333-4979738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27F2.2a.1 4965571 4979738 1

1 Sequence

Length
5611

1 Sequence Ontology Term

Identifier Name Description
transcript