WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27F2.5.2 Sequence Name  C27F2.5.2
Length (nt)  1417   Chromosome Location  III: 4960338-4962493
Chromosome . Primary Identifier  III Chromosome Location . Start  4960338
Chromosome Location . End  4962493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016167 vps-22 C27F2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27F2.5 C27F2.5 810   III: 4960612-4960804

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C27F2.5.2 4960338 4962493 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87490   467   III: 4960338-4960804 Caenorhabditis elegans
Exon87493   189   III: 4960868-4961056 Caenorhabditis elegans
Exon87495   107   III: 4961099-4961205 Caenorhabditis elegans
Exon87497   74   III: 4961256-4961329 Caenorhabditis elegans
Exon87499   107   III: 4961378-4961484 Caenorhabditis elegans
Exon87501   77   III: 4961533-4961609 Caenorhabditis elegans
Exon87503   64   III: 4961652-4961715 Caenorhabditis elegans
Exon87505   70   III: 4962039-4962108 Caenorhabditis elegans
Exon87506   219   III: 4962162-4962380 Caenorhabditis elegans
Exon87508   43   III: 4962451-4962493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C27F2.5.2 4960338 4962493 -1

1 Sequence

Length
1417

1 Sequence Ontology Term

Identifier Name Description
transcript