WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38D4.6a.2 Sequence Name  C38D4.6a.2
Length (nt)  1451   Chromosome Location  III: 4804709-4809576
Chromosome . Primary Identifier  III Chromosome Location . Start  4804709
Chromosome Location . End  4809576 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D4.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003912 pal-1 C38D4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.6a C38D4.6a 813   III: 4805211-4805253

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C38D4.6a.2 4804709 4809576 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86944   545   III: 4804709-4805253 Caenorhabditis elegans
Exon86946   172   III: 4806700-4806871 Caenorhabditis elegans
Exon86954   103   III: 4807046-4807148 Caenorhabditis elegans
Exon86957   288   III: 4807684-4807971 Caenorhabditis elegans
Exon86963   76   III: 4808026-4808101 Caenorhabditis elegans
Exon86967   132   III: 4808578-4808709 Caenorhabditis elegans
Exon86971   135   III: 4809442-4809576 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C38D4.6a.2 4804709 4809576 -1

1 Sequence

Length
1451

1 Sequence Ontology Term

Identifier Name Description
transcript