WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38D4.5a.1 Sequence Name  C38D4.5a.1
Length (nt)  2926   Chromosome Location  III: 4796839-4802907
Chromosome . Primary Identifier  III Chromosome Location . Start  4796839
Chromosome Location . End  4802907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008006 tag-325 C38D4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.5a C38D4.5a 2523   III: 4796911-4797006

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38D4.5a.1 4796839 4802907 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86905   168   III: 4796839-4797006 Caenorhabditis elegans
Exon86907   149   III: 4797059-4797207 Caenorhabditis elegans
Exon86909   175   III: 4797569-4797743 Caenorhabditis elegans
Exon86911   419   III: 4797816-4798234 Caenorhabditis elegans
Exon86913   475   III: 4798631-4799105 Caenorhabditis elegans
Exon86915   216   III: 4799570-4799785 Caenorhabditis elegans
Exon86917   110   III: 4800555-4800664 Caenorhabditis elegans
Exon86920   179   III: 4800749-4800927 Caenorhabditis elegans
Exon86923   127   III: 4801123-4801249 Caenorhabditis elegans
Exon86926   182   III: 4801729-4801910 Caenorhabditis elegans
Exon86929   254   III: 4801964-4802217 Caenorhabditis elegans
Exon86933   472   III: 4802436-4802907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38D4.5a.1 4796839 4802907 1

1 Sequence

Length
2926

1 Sequence Ontology Term

Identifier Name Description
transcript