WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38D4.3.1 Sequence Name  C38D4.3.1
Length (nt)  5463   Chromosome Location  III: 4786080-4792391
Chromosome . Primary Identifier  III Chromosome Location . Start  4786080
Chromosome Location . End  4792391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003210 mel-28 C38D4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.3 C38D4.3 5355   III: 4786081-4786171

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C38D4.3.1 4786080 4792391 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86879   92   III: 4786080-4786171 Caenorhabditis elegans
Exon86880   138   III: 4786216-4786353 Caenorhabditis elegans
Exon86881   249   III: 4786412-4786660 Caenorhabditis elegans
Exon86882   108   III: 4786707-4786814 Caenorhabditis elegans
Exon86883   917   III: 4786859-4787775 Caenorhabditis elegans
Exon86884   120   III: 4787824-4787943 Caenorhabditis elegans
Exon86885   485   III: 4787987-4788471 Caenorhabditis elegans
Exon86886   515   III: 4788525-4789039 Caenorhabditis elegans
Exon86887   344   III: 4789090-4789433 Caenorhabditis elegans
Exon86888   1089   III: 4789484-4790572 Caenorhabditis elegans
Exon86889   93   III: 4790628-4790720 Caenorhabditis elegans
Exon86890   93   III: 4790771-4790863 Caenorhabditis elegans
Exon86891   93   III: 4790909-4791001 Caenorhabditis elegans
Exon86892   303   III: 4791048-4791350 Caenorhabditis elegans
Exon86893   312   III: 4791398-4791709 Caenorhabditis elegans
Exon86894   228   III: 4791786-4792013 Caenorhabditis elegans
Exon86895   138   III: 4792059-4792196 Caenorhabditis elegans
Exon86896   146   III: 4792246-4792391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C38D4.3.1 4786080 4792391 1

1 Sequence

Length
5463

1 Sequence Ontology Term

Identifier Name Description
transcript