WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A8.5.1 Sequence Name  T04A8.5.1
Length (nt)  1600   Chromosome Location  III: 4689280-4692171
Chromosome . Primary Identifier  III Chromosome Location . Start  4689280
Chromosome Location . End  4692171 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011407 ppat-1 T04A8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A8.5 T04A8.5 1443   III: 4689345-4689433

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T04A8.5.1 4689280 4692171 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86641   154   III: 4689280-4689433 Caenorhabditis elegans
Exon86643   406   III: 4690058-4690463 Caenorhabditis elegans
Exon86644   261   III: 4690510-4690770 Caenorhabditis elegans
Exon86645   310   III: 4691006-4691315 Caenorhabditis elegans
Exon86646   116   III: 4691364-4691479 Caenorhabditis elegans
Exon86647   165   III: 4691775-4691939 Caenorhabditis elegans
Exon86648   188   III: 4691984-4692171 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T04A8.5.1 4689280 4692171 1

1 Sequence

Length
1600

1 Sequence Ontology Term

Identifier Name Description
transcript