WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M88.6b Sequence Name  M88.6b
Length (nt)  1785   Chromosome Location  III: 4562753-4562872
Chromosome . Primary Identifier  III Chromosome Location . Start  4562753
Chromosome Location . End  4562872
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23886 PAN-1, isoform b 66.4 594 Caenorhabditis elegans
 

Other

36 RNAi

WormBase ID
WBRNAi00095689
WBRNAi00067129
WBRNAi00067446
WBRNAi00067455
WBRNAi00067620
WBRNAi00051076
WBRNAi00009023
WBRNAi00066806
WBRNAi00096439
WBRNAi00108685
WBRNAi00109070
WBRNAi00096186
WBRNAi00034502
WBRNAi00109017
WBRNAi00108696
WBRNAi00096263
WBRNAi00086746
WBRNAi00115235
WBRNAi00095880
WBRNAi00086747
WBRNAi00096522
WBRNAi00108962
WBRNAi00115239
WBRNAi00026005
WBRNAi00095957
WBRNAi00108907
WBRNAi00005017
WBRNAi00064384
WBRNAi00108852
WBRNAi00096032

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M88.6b 4562753 4562872 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003915 pan-1 M88.6 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:M88.6b 4562753 4562872 1
CDS:M88.6b 4562941 4562999 1
CDS:M88.6b 4563056 4563179 1
CDS:M88.6b 4563282 4563625 1
CDS:M88.6b 4563677 4563897 1
CDS:M88.6b 4564234 4564446 1
CDS:M88.6b 4564495 4564646 1
CDS:M88.6b 4564696 4564825 1
CDS:M88.6b 4565401 4565669 1
CDS:M88.6b 4565727 4565879 1

1 Sequence

Length
1785

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M88.6b.1 M88.6b.1 2202   III: 4562738-4566281