WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M88.5e.2 Sequence Name  M88.5e.2
Length (nt)  3276   Chromosome Location  III: 4553630-4560431
Chromosome . Primary Identifier  III Chromosome Location . Start  4553630
Chromosome Location . End  4560431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.5e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010908 imph-1 M88.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M88.5e M88.5e 1944   III: 4556251-4556511

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M88.5e.2 4553630 4560431 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86131   197   III: 4553630-4553826 Caenorhabditis elegans
Exon86135   172   III: 4554186-4554357 Caenorhabditis elegans
Exon86139   113   III: 4554578-4554690 Caenorhabditis elegans
Exon86147   366   III: 4556146-4556511 Caenorhabditis elegans
Exon86149   162   III: 4556847-4557008 Caenorhabditis elegans
Exon86159   263   III: 4557101-4557363 Caenorhabditis elegans
Exon86165   123   III: 4557415-4557537 Caenorhabditis elegans
Exon86167   175   III: 4557578-4557752 Caenorhabditis elegans
Exon86175   105   III: 4557797-4557901 Caenorhabditis elegans
Exon86181   312   III: 4557980-4558291 Caenorhabditis elegans
Exon86187   304   III: 4558612-4558915 Caenorhabditis elegans
Exon86193   183   III: 4559400-4559582 Caenorhabditis elegans
Exon86195   801   III: 4559631-4560431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M88.5e.2 4553630 4560431 1

1 Sequence

Length
3276

1 Sequence Ontology Term

Identifier Name Description
transcript