WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M88.5a.1 Sequence Name  M88.5a.1
Length (nt)  3276   Chromosome Location  III: 4553618-4560438
Chromosome . Primary Identifier  III Chromosome Location . Start  4553618
Chromosome Location . End  4560438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010908 imph-1 M88.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M88.5a M88.5a 2487   III: 4553713-4553826

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M88.5a.1 4553618 4560438 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86130   209   III: 4553618-4553826 Caenorhabditis elegans
Exon86132   172   III: 4554186-4554357 Caenorhabditis elegans
Exon86137   113   III: 4554578-4554690 Caenorhabditis elegans
Exon86142   366   III: 4556146-4556511 Caenorhabditis elegans
Exon86150   156   III: 4556853-4557008 Caenorhabditis elegans
Exon86154   263   III: 4557101-4557363 Caenorhabditis elegans
Exon86160   123   III: 4557415-4557537 Caenorhabditis elegans
Exon86168   169   III: 4557584-4557752 Caenorhabditis elegans
Exon86172   105   III: 4557797-4557901 Caenorhabditis elegans
Exon86178   312   III: 4557980-4558291 Caenorhabditis elegans
Exon86182   304   III: 4558612-4558915 Caenorhabditis elegans
Exon86188   183   III: 4559400-4559582 Caenorhabditis elegans
Exon86199   801   III: 4559638-4560438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M88.5a.1 4553618 4560438 1

1 Sequence

Length
3276

1 Sequence Ontology Term

Identifier Name Description
transcript