WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M88.5e.1 Sequence Name  M88.5e.1
Length (nt)  3301   Chromosome Location  III: 4553617-4560431
Chromosome . Primary Identifier  III Chromosome Location . Start  4553617
Chromosome Location . End  4560431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M88.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010908 imph-1 M88.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M88.5e M88.5e 1944   III: 4556251-4556511

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M88.5e.1 4553617 4560431 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86129   210   III: 4553617-4553826 Caenorhabditis elegans
Exon86134   172   III: 4554186-4554357 Caenorhabditis elegans
Exon86136   125   III: 4554566-4554690 Caenorhabditis elegans
Exon86146   366   III: 4556146-4556511 Caenorhabditis elegans
Exon86148   162   III: 4556847-4557008 Caenorhabditis elegans
Exon86158   263   III: 4557101-4557363 Caenorhabditis elegans
Exon86164   123   III: 4557415-4557537 Caenorhabditis elegans
Exon86166   175   III: 4557578-4557752 Caenorhabditis elegans
Exon86174   105   III: 4557797-4557901 Caenorhabditis elegans
Exon86180   312   III: 4557980-4558291 Caenorhabditis elegans
Exon86186   304   III: 4558612-4558915 Caenorhabditis elegans
Exon86192   183   III: 4559400-4559582 Caenorhabditis elegans
Exon86194   801   III: 4559631-4560431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M88.5e.1 4553617 4560431 1

1 Sequence

Length
3301

1 Sequence Ontology Term

Identifier Name Description
transcript