WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28A5.2.1 Sequence Name  C28A5.2.1
Length (nt)  3771   Chromosome Location  III: 4434750-4439543
Chromosome . Primary Identifier  III Chromosome Location . Start  4434750
Chromosome Location . End  4439543 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28A5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007789 C28A5.2 C28A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28A5.2 C28A5.2 3657   III: 4434864-4434905

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C28A5.2.1 4434750 4439543 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85885   156   III: 4434750-4434905 Caenorhabditis elegans
Exon85886   172   III: 4434958-4435129 Caenorhabditis elegans
Exon85887   497   III: 4435186-4435682 Caenorhabditis elegans
Exon85888   84   III: 4435821-4435904 Caenorhabditis elegans
Exon85889   237   III: 4435950-4436186 Caenorhabditis elegans
Exon85890   79   III: 4436290-4436368 Caenorhabditis elegans
Exon85891   234   III: 4436417-4436650 Caenorhabditis elegans
Exon85892   804   III: 4436703-4437506 Caenorhabditis elegans
Exon85893   137   III: 4437557-4437693 Caenorhabditis elegans
Exon85894   103   III: 4437740-4437842 Caenorhabditis elegans
Exon85895   212   III: 4437889-4438100 Caenorhabditis elegans
Exon85896   198   III: 4438205-4438402 Caenorhabditis elegans
Exon85897   121   III: 4438449-4438569 Caenorhabditis elegans
Exon85898   176   III: 4438617-4438792 Caenorhabditis elegans
Exon85899   303   III: 4438842-4439144 Caenorhabditis elegans
Exon85900   66   III: 4439192-4439257 Caenorhabditis elegans
Exon85901   138   III: 4439303-4439440 Caenorhabditis elegans
Exon85902   54   III: 4439490-4439543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C28A5.2.1 4434750 4439543 -1

1 Sequence

Length
3771

1 Sequence Ontology Term

Identifier Name Description
transcript