WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C28A5.1.1 Sequence Name  C28A5.1.1
Length (nt)  3781   Chromosome Location  III: 4429615-4434344
Chromosome . Primary Identifier  III Chromosome Location . Start  4429615
Chromosome Location . End  4434344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C28A5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007788 C28A5.1 C28A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C28A5.1 C28A5.1 3672   III: 4429724-4429765

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C28A5.1.1 4429615 4434344 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85866   151   III: 4429615-4429765 Caenorhabditis elegans
Exon85867   172   III: 4429815-4429986 Caenorhabditis elegans
Exon85868   497   III: 4430035-4430531 Caenorhabditis elegans
Exon85869   84   III: 4430581-4430664 Caenorhabditis elegans
Exon85870   246   III: 4430717-4430962 Caenorhabditis elegans
Exon85871   79   III: 4431087-4431165 Caenorhabditis elegans
Exon85872   240   III: 4431212-4431451 Caenorhabditis elegans
Exon85873   804   III: 4431504-4432307 Caenorhabditis elegans
Exon85874   137   III: 4432358-4432494 Caenorhabditis elegans
Exon85875   103   III: 4432541-4432643 Caenorhabditis elegans
Exon85876   212   III: 4432690-4432901 Caenorhabditis elegans
Exon85877   198   III: 4433006-4433203 Caenorhabditis elegans
Exon85878   121   III: 4433250-4433370 Caenorhabditis elegans
Exon85879   176   III: 4433418-4433593 Caenorhabditis elegans
Exon85880   303   III: 4433643-4433945 Caenorhabditis elegans
Exon85881   66   III: 4433993-4434058 Caenorhabditis elegans
Exon85882   138   III: 4434104-4434241 Caenorhabditis elegans
Exon85884   54   III: 4434291-4434344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C28A5.1.1 4429615 4434344 -1

1 Sequence

Length
3781

1 Sequence Ontology Term

Identifier Name Description
transcript