WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E5.8a.1 Sequence Name  R07E5.8a.1
Length (nt)  2269   Chromosome Location  III: 4419848-4423375
Chromosome . Primary Identifier  III Chromosome Location . Start  4419848
Chromosome Location . End  4423375 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E5.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000520 cku-80 R07E5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E5.8a R07E5.8a 2142   III: 4419856-4419996

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07E5.8a.1 4419848 4423375 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85811   149   III: 4419848-4419996 Caenorhabditis elegans
Exon85813   196   III: 4420044-4420239 Caenorhabditis elegans
Exon85815   178   III: 4420289-4420466 Caenorhabditis elegans
Exon85817   84   III: 4420513-4420596 Caenorhabditis elegans
Exon85819   73   III: 4420919-4420991 Caenorhabditis elegans
Exon85821   235   III: 4421042-4421276 Caenorhabditis elegans
Exon85823   131   III: 4421322-4421452 Caenorhabditis elegans
Exon85825   316   III: 4421898-4422213 Caenorhabditis elegans
Exon85828   61   III: 4422266-4422326 Caenorhabditis elegans
Exon85831   86   III: 4422372-4422457 Caenorhabditis elegans
Exon85835   419   III: 4422511-4422929 Caenorhabditis elegans
Exon85839   133   III: 4422982-4423114 Caenorhabditis elegans
Exon85846   208   III: 4423168-4423375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07E5.8a.1 4419848 4423375 1

1 Sequence

Length
2269

1 Sequence Ontology Term

Identifier Name Description
transcript