WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H38K22.5a.2 Sequence Name  H38K22.5a.2
Length (nt)  2698   Chromosome Location  III: 4324280-4331228
Chromosome . Primary Identifier  III Chromosome Location . Start  4324280
Chromosome Location . End  4331228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H38K22.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001631 gly-6 H38K22.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H38K22.5a H38K22.5a 1857   III: 4324799-4324843

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H38K22.5a.2 4324280 4331228 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85479   564   III: 4324280-4324843 Caenorhabditis elegans
Exon85485   123   III: 4325039-4325161 Caenorhabditis elegans
Exon85491   150   III: 4325206-4325355 Caenorhabditis elegans
Exon85500   108   III: 4325535-4325642 Caenorhabditis elegans
Exon85504   143   III: 4325746-4325888 Caenorhabditis elegans
Exon85509   184   III: 4326071-4326254 Caenorhabditis elegans
Exon85514   500   III: 4326299-4326798 Caenorhabditis elegans
Exon85519   144   III: 4326982-4327125 Caenorhabditis elegans
Exon85524   268   III: 4327302-4327569 Caenorhabditis elegans
Exon85529   66   III: 4327703-4327768 Caenorhabditis elegans
Exon85534   172   III: 4327816-4327987 Caenorhabditis elegans
Exon85539   276   III: 4330953-4331228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H38K22.5a.2 4324280 4331228 -1

1 Sequence

Length
2698

1 Sequence Ontology Term

Identifier Name Description
transcript