WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08A11.1f.1 Sequence Name  T08A11.1f.1
Length (nt)  5669   Chromosome Location  III: 4248152-4263048
Chromosome . Primary Identifier  III Chromosome Location . Start  4248152
Chromosome Location . End  4263048 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08A11.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011604 depd-5 T08A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08A11.1f T08A11.1f 5151   III: 4248670-4248820

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08A11.1f.1 4248152 4263048 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85095   669   III: 4248152-4248820 Caenorhabditis elegans
Exon85103   551   III: 4249533-4250083 Caenorhabditis elegans
Exon85111   263   III: 4250748-4251010 Caenorhabditis elegans
Exon85119   90   III: 4251371-4251460 Caenorhabditis elegans
Exon85127   517   III: 4251856-4252372 Caenorhabditis elegans
Exon85135   402   III: 4252612-4253013 Caenorhabditis elegans
Exon85144   235   III: 4253292-4253526 Caenorhabditis elegans
Exon85150   349   III: 4253576-4253924 Caenorhabditis elegans
Exon85161   303   III: 4257711-4258013 Caenorhabditis elegans
Exon85168   82   III: 4258057-4258138 Caenorhabditis elegans
Exon85176   873   III: 4258192-4259064 Caenorhabditis elegans
Exon85184   183   III: 4259572-4259754 Caenorhabditis elegans
Exon85192   138   III: 4259802-4259939 Caenorhabditis elegans
Exon85200   396   III: 4260882-4261277 Caenorhabditis elegans
Exon85208   108   III: 4261526-4261633 Caenorhabditis elegans
Exon85216   336   III: 4261680-4262015 Caenorhabditis elegans
Exon85221   174   III: 4262875-4263048 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08A11.1f.1 4248152 4263048 -1

1 Sequence

Length
5669

1 Sequence Ontology Term

Identifier Name Description
transcript