WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08A11.1b.1 Sequence Name  T08A11.1b.1
Length (nt)  5759   Chromosome Location  III: 4248152-4263144
Chromosome . Primary Identifier  III Chromosome Location . Start  4248152
Chromosome Location . End  4263144 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08A11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011604 depd-5 T08A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08A11.1b T08A11.1b 5145   III: 4248670-4248820

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08A11.1b.1 4248152 4263144 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85091   669   III: 4248152-4248820 Caenorhabditis elegans
Exon85099   551   III: 4249533-4250083 Caenorhabditis elegans
Exon85107   257   III: 4250748-4251004 Caenorhabditis elegans
Exon85115   90   III: 4251371-4251460 Caenorhabditis elegans
Exon85123   517   III: 4251856-4252372 Caenorhabditis elegans
Exon85131   402   III: 4252612-4253013 Caenorhabditis elegans
Exon85140   235   III: 4253292-4253526 Caenorhabditis elegans
Exon85148   349   III: 4253576-4253924 Caenorhabditis elegans
Exon85159   303   III: 4257711-4258013 Caenorhabditis elegans
Exon85164   82   III: 4258057-4258138 Caenorhabditis elegans
Exon85172   873   III: 4258192-4259064 Caenorhabditis elegans
Exon85180   183   III: 4259572-4259754 Caenorhabditis elegans
Exon85188   138   III: 4259802-4259939 Caenorhabditis elegans
Exon85196   396   III: 4260882-4261277 Caenorhabditis elegans
Exon85204   108   III: 4261526-4261633 Caenorhabditis elegans
Exon85212   336   III: 4261680-4262015 Caenorhabditis elegans
Exon85222   270   III: 4262875-4263144 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08A11.1b.1 4248152 4263144 -1

1 Sequence

Length
5759

1 Sequence Ontology Term

Identifier Name Description
transcript