WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43C1.4.1 Sequence Name  F43C1.4.1
Length (nt)  1578   Chromosome Location  III: 4230436-4233219
Chromosome . Primary Identifier  III Chromosome Location . Start  4230436
Chromosome Location . End  4233219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003619 nhr-20 F43C1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43C1.4 F43C1.4 1374   III: 4230623-4230718

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F43C1.4.1 4230436 4233219 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85068   283   III: 4230436-4230718 Caenorhabditis elegans
Exon85069   158   III: 4230777-4230934 Caenorhabditis elegans
Exon85070   116   III: 4230983-4231098 Caenorhabditis elegans
Exon85071   320   III: 4231403-4231722 Caenorhabditis elegans
Exon85072   158   III: 4231875-4232032 Caenorhabditis elegans
Exon85073   61   III: 4232138-4232198 Caenorhabditis elegans
Exon85074   89   III: 4232341-4232429 Caenorhabditis elegans
Exon85075   177   III: 4232551-4232727 Caenorhabditis elegans
Exon85076   216   III: 4233004-4233219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F43C1.4.1 4230436 4233219 -1

1 Sequence

Length
1578

1 Sequence Ontology Term

Identifier Name Description
transcript