WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43C1.2b.1 Sequence Name  F43C1.2b.1
Length (nt)  1335   Chromosome Location  III: 4217396-4228094
Chromosome . Primary Identifier  III Chromosome Location . Start  4217396
Chromosome Location . End  4228094 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C1.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003401 mpk-1 F43C1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43C1.2b F43C1.2b 1335   III: 4217396-4217615

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F43C1.2b.1 4217396 4228094 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85044   220   III: 4217396-4217615 Caenorhabditis elegans
Exon85047   600   III: 4218081-4218680 Caenorhabditis elegans
Exon85050   56   III: 4219078-4219133 Caenorhabditis elegans
Exon85053   127   III: 4219188-4219314 Caenorhabditis elegans
Exon85056   59   III: 4219465-4219523 Caenorhabditis elegans
Exon85059   69   III: 4219575-4219643 Caenorhabditis elegans
Exon85060   204   III: 4227891-4228094 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F43C1.2b.1 4217396 4228094 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
transcript