WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43C1.1.1 Sequence Name  F43C1.1.1
Length (nt)  3428   Chromosome Location  III: 4209488-4216749
Chromosome . Primary Identifier  III Chromosome Location . Start  4209488
Chromosome Location . End  4216749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009647 phlp-2 F43C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43C1.1 F43C1.1 3381   III: 4209492-4209700

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F43C1.1.1 4209488 4216749 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85024   213   III: 4209488-4209700 Caenorhabditis elegans
Exon85025   308   III: 4210501-4210808 Caenorhabditis elegans
Exon85026   66   III: 4210926-4210991 Caenorhabditis elegans
Exon85027   233   III: 4211045-4211277 Caenorhabditis elegans
Exon85028   294   III: 4211637-4211930 Caenorhabditis elegans
Exon85029   225   III: 4211983-4212207 Caenorhabditis elegans
Exon85030   82   III: 4212631-4212712 Caenorhabditis elegans
Exon85031   157   III: 4212759-4212915 Caenorhabditis elegans
Exon85032   156   III: 4212969-4213124 Caenorhabditis elegans
Exon85033   79   III: 4213170-4213248 Caenorhabditis elegans
Exon85034   279   III: 4213798-4214076 Caenorhabditis elegans
Exon85035   230   III: 4214145-4214374 Caenorhabditis elegans
Exon85036   115   III: 4214595-4214709 Caenorhabditis elegans
Exon85037   76   III: 4214760-4214835 Caenorhabditis elegans
Exon85038   97   III: 4215042-4215138 Caenorhabditis elegans
Exon85039   298   III: 4215456-4215753 Caenorhabditis elegans
Exon85040   149   III: 4215898-4216046 Caenorhabditis elegans
Exon85041   371   III: 4216379-4216749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F43C1.1.1 4209488 4216749 1

1 Sequence

Length
3428

1 Sequence Ontology Term

Identifier Name Description
transcript