WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C10.3.1 Sequence Name  C16C10.3.1
Length (nt)  3537   Chromosome Location  III: 4172337-4176159
Chromosome . Primary Identifier  III Chromosome Location . Start  4172337
Chromosome Location . End  4176159 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007624 hrde-1 C16C10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C10.3 C16C10.3 3099   III: 4172769-4172928

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C16C10.3.1 4172337 4176159 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84919   592   III: 4172337-4172928 Caenorhabditis elegans
Exon84920   191   III: 4172978-4173168 Caenorhabditis elegans
Exon84921   949   III: 4173214-4174162 Caenorhabditis elegans
Exon84922   525   III: 4174210-4174734 Caenorhabditis elegans
Exon84923   954   III: 4174784-4175737 Caenorhabditis elegans
Exon84924   211   III: 4175783-4175993 Caenorhabditis elegans
Exon84925   115   III: 4176045-4176159 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C16C10.3.1 4172337 4176159 -1

1 Sequence

Length
3537

1 Sequence Ontology Term

Identifier Name Description
transcript