WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B10.1e.1 Sequence Name  F13B10.1e.1
Length (nt)  3669   Chromosome Location  III: 3869591-3887730
Chromosome . Primary Identifier  III Chromosome Location . Start  3869591
Chromosome Location . End  3887730 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B10.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006575 tir-1 F13B10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.1e F13B10.1e 2406   III: 3870183-3870277

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F13B10.1e.1 3869591 3887730 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84072   687   III: 3869591-3870277 Caenorhabditis elegans
Exon84085   118   III: 3870326-3870443 Caenorhabditis elegans
Exon84098   1035   III: 3870600-3871634 Caenorhabditis elegans
Exon84111   115   III: 3880116-3880230 Caenorhabditis elegans
Exon84121   378   III: 3880279-3880656 Caenorhabditis elegans
Exon84131   119   III: 3880957-3881075 Caenorhabditis elegans
Exon84141   231   III: 3881123-3881353 Caenorhabditis elegans
Exon84151   375   III: 3881631-3882005 Caenorhabditis elegans
Exon84161   241   III: 3882307-3882547 Caenorhabditis elegans
Exon84169   370   III: 3887361-3887730 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F13B10.1e.1 3869591 3887730 -1

1 Sequence

Length
3669

1 Sequence Ontology Term

Identifier Name Description
transcript