WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13B10.1e.2 Sequence Name  F13B10.1e.2
Length (nt)  3394   Chromosome Location  III: 3869591-3882726
Chromosome . Primary Identifier  III Chromosome Location . Start  3869591
Chromosome Location . End  3882726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13B10.1e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006575 tir-1 F13B10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.1e F13B10.1e 2406   III: 3870183-3870277

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F13B10.1e.2 3869591 3882726 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84071   687   III: 3869591-3870277 Caenorhabditis elegans
Exon84086   118   III: 3870326-3870443 Caenorhabditis elegans
Exon84099   1035   III: 3870600-3871634 Caenorhabditis elegans
Exon84112   115   III: 3880116-3880230 Caenorhabditis elegans
Exon84122   378   III: 3880279-3880656 Caenorhabditis elegans
Exon84132   119   III: 3880957-3881075 Caenorhabditis elegans
Exon84142   231   III: 3881123-3881353 Caenorhabditis elegans
Exon84152   375   III: 3881631-3882005 Caenorhabditis elegans
Exon84162   241   III: 3882307-3882547 Caenorhabditis elegans
Exon84166   95   III: 3882632-3882726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F13B10.1e.2 3869591 3882726 -1

1 Sequence

Length
3394

1 Sequence Ontology Term

Identifier Name Description
transcript