WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36A4.8a.1 Sequence Name  C36A4.8a.1
Length (nt)  1979   Chromosome Location  III: 3853089-3862958
Chromosome . Primary Identifier  III Chromosome Location . Start  3853089
Chromosome Location . End  3862958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36A4.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000264 brc-1 C36A4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36A4.8a C36A4.8a 1830   III: 3853238-3853486

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C36A4.8a.1 3853089 3862958 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84015   398   III: 3853089-3853486 Caenorhabditis elegans
Exon84019   174   III: 3854182-3854355 Caenorhabditis elegans
Exon84024   119   III: 3858318-3858436 Caenorhabditis elegans
Exon84026   100   III: 3858946-3859045 Caenorhabditis elegans
Exon84028   129   III: 3859093-3859221 Caenorhabditis elegans
Exon84031   339   III: 3861280-3861618 Caenorhabditis elegans
Exon84033   74   III: 3861681-3861754 Caenorhabditis elegans
Exon84035   229   III: 3861804-3862032 Caenorhabditis elegans
Exon84037   346   III: 3862489-3862834 Caenorhabditis elegans
Exon84039   71   III: 3862888-3862958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C36A4.8a.1 3853089 3862958 -1

1 Sequence

Length
1979

1 Sequence Ontology Term

Identifier Name Description
transcript