WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48D5.2c Sequence Name  C48D5.2c
Length (nt)  1770   Chromosome Location  III: 3595225-3595253
Chromosome . Primary Identifier  III Chromosome Location . Start  3595225
Chromosome Location . End  3595253
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D5.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31450 PTP-1, isoform c 65.1 589 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002118
WBRNAi00114837
WBRNAi00029944

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C48D5.2c 3595225 3595253 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004213 ptp-1 C48D5.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C48D5.2c 3595225 3595253 1
CDS:C48D5.2c 3604815 3604917 1
CDS:C48D5.2c 3607049 3607232 1
CDS:C48D5.2c 3607558 3607745 1
CDS:C48D5.2c 3608124 3608424 1
CDS:C48D5.2c 3608994 3609222 1
CDS:C48D5.2c 3609685 3609772 1
CDS:C48D5.2c 3609824 3610099 1
CDS:C48D5.2c 3610561 3610845 1
CDS:C48D5.2c 3611478 3611564 1

1 Sequence

Length
1770

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48D5.2c.1 C48D5.2c.1 1773   III: 3595222-3611564